Can I make a specific price for autoship products vs. non autoship product?
Yes, you can specify an Autoship price that is unique to a Product or Product Variation purchased with an Autoship schedule.
For simple products, edit Product Data > Autoship (tab) > Autoship Price (field)
For variable products, edit Product Data > Variations (tab) > (expand) Variation > Autoship Price (field)
Autoship Price for Simple Product
Autoship Price for Variable Product